Josep Biayna

    Research Group: 
    Genome Data Science
    Unit: 
    CANCER SCIENCE
    Position: 
    Postdoctoral Fellow
    Office: 
    CL01C74
    Telephone: 
    +34 93 40 39954
    Email: 
    josep.biayna@irbbarcelona.org

     

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    Selected group publications

    Matching cell lines with cancer type and subtype of origin via mutational, epigenomic, and transcriptomic patterns
    Marina Salvadores, Francisco Fuster-Tormo, Fran Supek
    Sci Adv, 6 (27), eaba1862 (2020)
    DNA mismatch repair promotes APOBEC3-mediated diffuse hypermutation in human cancers
    David Mas-Ponte, Fran Supek
    Nat Genet, 52 (9), 958 (2020)
    The impact of nonsense-mediated mRNA decay on genetic disease, gene editing and cancer immunotherapy
    Lindeboom RGH, Vermeulen M, Lehner B and Supek F.
    Nat Genet, 51 (11), 1645-1651 (2019)
    Phenotype prediction with semi-supervised classification trees
    Levatić J., Brbić M., Perdih T.S., Kocev D., Vidulin V., Šmuc T., Supek F., Džeroski S.
    Lect Notes Comput Sc, 138-150 (2018)
    The evolutionary signal in metagenome phyletic profiles predicts many gene functions
    Vidulin V, Šmuc T, Džeroski S and Supek F.
    Microbiome, 6 (1), 129 (2018)
    Clustered Mutation Signatures Reveal that Error-Prone DNA Repair Targets Mutations to Active Genes
    Supek F and Lehner B.
    Cell, 170 (3), 534-547.e2 (2017)
    The landscape of microbial phenotypic traits and associated genes
    M Brbić, M Piškorec, V Vidulin, A Kriško, T Šmuc, F Supek
    Nucl Acids Res, (2016)
    The rules and impact of nonsense-mediated mRNA decay in human cancers
    RGH Lindeboom, F Supek*, B Lehner*
    Nature Genetics, (2016)
    Differential DNA mismatch repair underlies mutation rate variation across the human genome
    F Supek, B Lehner
    Nature, (2015)
    Inferring gene function from evolutionary change in signatures of translation efficiency
    A Krisko, T Copic, T Gabaldón, B Lehner, F Supek
    Genome Biology, (2014)
    Synonymous mutations frequently act as driver mutations in human cancers
    F Supek, B Miñana, J Valcárcel, T Gabaldón, B Lehner
    Cell, (2014)
    Full publication list