Advanced Digital Microscopy (ADM) publications

The NEUBIAS Gateway: a hub for bioimage analysis methods and materials

Cimini BA, Nørrelykke SF, Louveaux M, Sladoje N, Paul-Gilloteaux P, Colombelli J, Miura K

F1000Research, 9 613 (2020)

BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows

Rubens U, Mormont R, Paavolainen L, Bäcker V, Pavie B, Scholz LA, Michiels G, Maška M, Ünay D, Ball G, Hoyoux R, Vandaele R, Golani O, Stanciu SG, Sladoje N, Paul-Gilloteaux P, Marée R, Tosi S

Cell Patterns , 1 (3), 100040 (2020)

From whole-organ imaging to in-silico blood flow modeling: A new multi-scale network analysis for revisiting tissue functional anatomy

Kennel P, Dichamp J, Barreau C, Guissard C, Teyssedre L, Rouquette J, Colombelli J, Lorsignol A, Casteilla L and Plouraboué F.

Plos Comput Biol, 16 (2), e1007322 (2020)

Workflows and Components of Bioimage Analysis

Miura K, Paul-Gilloteaux P, Tosi S, Colombelli J

, 1 1-7 (2020)

LOBSTER: An environment to design bioimage analysis workflows for large and complex fluorescence microscopy data

Tosi S, Bardia L, Filgueira MJ, Calon A and Colombelli J.

Bioinformatics (2019)

Sidekick Is a Key Component of Tricellular Adherens Junctions that Acts to Resolve Cell Rearrangements

Letizia A, He D, Astigarraga S, Colombelli J, Hatini V, Llimargas M and Treisman JE.

Dev Cell, 50 (3), 313-326.e5 (2019)

Reversible silencing of endogenous receptors in intact brain tissue using 2-photon pharmacology

Pittolo S, Lee H, Lladó A, Tosi S, Bosch M, Bardia L, Gómez-Santacana X, Llebaria A, Soriano E, Colombelli J, Poskanzer KE, Perea G and Gorostiza P.

PNAS, 116 (27), 13680-1368 (2019)

Autophagy-induced senescence is regulated by p38α signaling

Slobodnyuk K, Radic N, Ivanova S, Llado A, Trempolec N, Zorzano A and Nebreda AR.

Cell Death Dis, 10 (6), 376 (2019)

Regional vulnerability and spreading of hyperphosphorylated tau in seeded mouse brain

Detrez JR, Maurin H, Van Kolen K, Willems R, Colombelli J, Lechat B, Roucourt B, Van Leuven F, Baatout S, Larsen P, Nuydens R, Timmermans JP and De Vos WH.

Neurobiol Dis, 127 398-409 (2019)

Self-Sensing Enzyme-Powered Micromotors Equipped with pH-Responsive DNA Nanoswitches

Patino T, Porchetta A, Jannasch A, Lladó A, Stumpp T, Schäffer E, Ricci F and Sánchez S.

Nano Lett, 19 (6), 3440-3447 (2019)