1. Research
  2. Genome Data Science
  3. Genome Data Science publications

Genome Data Science publications

Sequence diversity of the Rh blood group system in Basques
Flores-Bello A, Mas-Ponte D, Rosu ME, Bosch E, Calafell F and Comas D.
Eur J Hum Genet, 26 (12), 1859-1866 (2018)
Loss of G9a preserves mutation patterns but increases chromatin accessibility, genomic instability and aggressiveness in skin tumours
Avgustinova A, Symeonidi A, Castellanos A, Urdiroz-Urricelqui U, Solé-Boldo L, Martín M, Pérez-Rodríguez I, Prats N, Lehner B, Supek F and Benitah SA.
Nat Cell Biol, 20 (12), 1400-1409 (2018)
The evolutionary signal in metagenome phyletic profiles predicts many gene functions
Vidulin V, Šmuc T, Džeroski S and Supek F.
Microbiome, 6 (1), 129 (2018)
Systematic discovery of germline cancer predisposition genes through the identification of somatic second hits
Park S, Supek F and Lehner B.
Nat Commun, 9 (1), 2601 (2018)
A novel long non-coding RNA from NBL2 pericentromeric macrosatellite forms a perinucleolar aggregate structure in colon cancer
Dumbovic G, Biayna J, Banús J, Samuelsson J, Roth A, Diederichs S, Alonso S, Buschbeck M, Perucho M and Forcales SV.
Nucleic Acids Res, 46 (11), 5504-5524 (2018)
Machine learning prioritizes synthesis of primaquine ureidoamides with high antimalarial activity and attenuated cytotoxicity
Levatić J, Pavić K, Perković I, Uzelac L, Ester K, Kralj M, Kaiser M, Rottmann M, Supek F and Zorc B.
Eur J Med Chem, 146 651-667 (2018)
Clustered Mutation Signatures Reveal that Error-Prone DNA Repair Targets Mutations to Active Genes
Supek F and Lehner B.
Cell, 170 (3), 534-547.e2 (2017)
The code of silence: widespread associations between synonymous codon biases and gene function
F Supek
Journal of molecular evolution, 1 (82), 73-65 (2016)
MUFFINN: cancer gene discovery via network analysis of somatic mutation data
A Cho, JE Shim, E Kim, F Supek, B Lehner, I Lee
Genome Biology, 1 (17), -29 (2016)
Extensive complementarity between gene function prediction methods
V Vidulin, T Šmuc, F Supek
Bioinformatics (btw532), (2016)

* shared senior authorship