Cáncer Colorectal Cancer Laboratory

Unraveling Cancer Stem Cells and the Origins of Metastasis

Eduard Batlle

Group Leader

ICREA Research Professor, ERC Advanced Grant

eduard.batlle@irbbarcelona.org

+34 93 40 39008

Research keywords

Meet Our Scientists Videos

Eduard Batlle: "Deconstruir el cáncer de colon"

Colorectal cancer (CRC) is the most frequent and the second-most deadly type of cancer with around 700,000 deaths worldwide. Most colorectal tumors develop as benign lesions but a small proportion progress to more malignant stages when the appropriate alterations in oncogenes and tumour suppressor genes occur. The final and deadliest step in colorectal cancer progression is the metastatic dissemination of CRC cells to foreign organs such as the liver and the lungs.

Research interests

Our lab studies the evolution of intestinal stem cells and their ecosystem during cancer progression, with a particular interests in unraveling how the tumor microenvironment facilitates immune evasion and metastasis. The ultimate goal is to obtain information that help design new therapeutic and diagnostic tools.

Research lines

1. Connecting stem cells to colorectal cancer
Tissues such as the intestinal epithelium and the hematopoietic system continuously self-renew through the activity of a dedicated population of tissue-specific stem cells. Unlike the bulk of the cells that populate these tissues, adult stem cells are long-lived and generate cellular progeny throughout life to regenerate the multiple specialized, short-lived cells that ultimately perform tissue-specific functions. The cancer stem cell (CSCs) theory states that tumor growth is similarly fueled by small numbers of tumor stem cells hidden in cancers. It explains clinical obser¬vations, such as the almost inevitable recurrence of tumors after initially successful chemotherapy and/or radiation therapy, the phenomenon of tumor dormancy, and metastasis. Our laboratory pioneers the notion that colorectal cancers retain a cell hierarchy similar to that of the normal intestinal mucosa. We have characterized extensively tumor stem cell population in CRCs and its role in chemotherapy resistance and relapse. We are currently pursuing the following questions:

- How does the tumor niche specify the CSC state?
- To which extent are tumor-cell phenotypes reversible or interchangeable?
- What type of ‘regenerative’ responses occur upon CSC loss in a tumor, and how are these controlled?
- Which are the intermedi¬ate states adopted by tumor cells during invasion?
- How metabolic states of tumor stem cells controlled, and what are their effects?

2. Tumor microenvironment, immune evasion and metastasis
A large proportion of deaths by colorectal cancer are the consequence of metastasis. This process involves the regeneration of a full-blown tumor from disseminated cancer cells and it is intrinsically inefficient mainly due to the inability of isolated tumor cells to colonize host tissues and reinitiate tumor growth in a different environment. The most accepted view is that competences to overcome this bottleneck result from clonal selection of appropriate genetic alterations in cancer cells. However, primary CRCs and metastases do not differ significantly in their mutational content and none of the main alterations in driver oncogenes and tumor suppressor genes correlate significantly with patient outcome. Our laboratory recently discovered that the key genetic programs associated to poor prognosis in CRC patients are expressed in cells of the tumor microenvironment (TME). TGF-beta signaling is the main architect of the TME in metastatic CRC and appears to help metastatic cancer cells evade the immune system. This finding opens up the development of new therapeutic and diagnostic tools for advanced CRC patients based on targeting the TME. Key questions and research lines in this area include:

- Why some CRCs develop a TGF-beta-activated TME and others don’t?
- How cancer associated fibroblasts mediate the phenomenon of immune exclusion?
- Genetic analysis of the metastatic niche.
- How systemic factors influence cancer recurrence?

Selected publications

Zonation of Ribosomal DNA Transcription Defines a Stem Cell Hierarchy in Colorectal Cancer

Morral C, Stanisavljevic J, Hernando-Momblona X, Mereu E, Álvarez-Varela A, Cortina C, Stork D, Slebe F, Turon G, Whissell G, Sevillano M, Merlos-Suárez A, Casanova-Martí À, Moutinho C, Lowe SW, Dow LE, Villanueva A, Sancho E, Heyn H and Batlle E.

Cell Stem Cell, 26 (6), 845-861.e1 (2020)

Transforming Growth Factor-β Signaling in Immunity and Cancer

Batlle E and Massagué J.

Immunity, 50 (4), 924-940 (2019)

TGFβ drives immune evasion in genetically reconstituted colon cancer metastasis

Tauriello DVF, Palomo-Ponce S, Stork D, Berenguer-Llergo A, Badia-Ramentol J, Iglesias M, Sevillano M, Ibiza S, Cañellas A, Hernando-Momblona X, Byrom D, Matarin JA, Calon A, Rivas EI, Nebreda AR, Riera A, Attolini CS and Batlle E.

Nature, 554 (7693), 538-543 (2018)

Cancer stem cells revisited

Batlle E and Clevers H.

Nat Med, 23 (10), 1124-1134 (2017)

A genome editing approach to study cancer stem cells in human tumors

Cortina C, Turon G, Stork D, Hernando-Momblona X, Sevillano M, Aguilera M, Tosi S, Merlos-Suárez A, Stephan-Otto Attolini C, Sancho E and Batlle E.

EMBO Mol Med, 9 (7), 869-879 (2017)

Mex3a Marks a Slowly Dividing Subpopulation of Lgr5+ Intestinal Stem Cells

Barriga FM, Montagni E, Mana M, Mendez-Lago M, Hernando-Momblona X, Sevillano M, Guillaumet-Adkins A, Rodriguez-Esteban G, Buczacki SJA, Gut M, Heyn H, Winton DJ, Yilmaz OH, Attolini CS, Gut I and Batlle E.

Cell Stem Cell, 20 (6), 801-816.e7 (2017)

Stromal gene expression defines poor-prognosis subtypes in colorectal cancer

Calon A, Lonardo E, Berenguer-Llergo A, Espinet E, Hernando-Momblona X, Iglesias M, Sevillano M, Palomo-Ponce S, Tauriello DV, Byrom D, Cortina C, Morral C, Barceló C, Tosi S, Riera A, Attolini CS, Rossell D, Sancho E and Batlle E.

Nat Genet, 47 (4), 320-329 (2015)

Metastatic stem cells: sources, niches, and vital pathways

Oskarsson T, Batlle E and Massagué J.

Cell Stem Cell, 14 (3), 306-21 (2014)

The transcription factor GATA6 enables self-renewal of colon adenoma stem cells by repressing BMP gene expression

Whissell G, Montagni E, Martinelli P, Hernando-Momblona X, Sevillano M, Jung P, Cortina C, Calon A, Abuli A, Castells A, Castellvi-Bel S, Nacht AS, Sancho E, Stephan-Otto Attolini C, Vicent GP, Real FX and Batlle E.

Nat Cell Biol, 16 (7), 695-707 (2014)

Colon cancer cells colonize the lung from established liver metastases through p38 MAPK signalling and PTHLH

Urosevic J, Garcia-Albéniz X, Planet E, Real S, Céspedes MV, Guiu M, Fernandez E, Bellmunt A, Gawrzak S, Pavlovic M, Mangues R, Dolado I, Barriga FM, Nadal C, Kemeny N, Batlle E, Nebreda AR and Gomis RR.

Nat Cell Biol, 16 (7), 685-94 (2014)

Dependency of colorectal cancer on a TGF-β-driven program in stromal cells for metastasis initiation

Calon A, Espinet E, Palomo-Ponce S, Tauriello DV, Iglesias M, Céspedes MV, Sevillano M, Nadal C, Jung P, Zhang XH, Byrom D, Riera A, Rossell D, Mangues R, Massagué J, Sancho E and Batlle E.

Cancer Cell, 22 (5), 571-84 (2012)

Specific GATA factors act as conserved inducers of an endodermal-EMT

Campbell K, Whissell G, Franch-Marro X, Batlle E and Casanova J.

Dev Cell, 21 (6), 1051-61 (2011)

Isolation and in vitro expansion of human colonic stem cells

Jung P, Sato T, Merlos-Suárez A, Barriga FM, Iglesias M, Rossell D, Auer H, Gallardo M, Blasco MA, Sancho E, Clevers H and Batlle E.

Nat Med, 17 (10), 1225-7 (2011)

Cleavage of E-cadherin by ADAM10 mediates epithelial cell sorting downstream of EphB signalling

Solanas G, Cortina C, Sevillano M and Batlle E.

Nat Cell Biol, 13 (9), 1100-7 (2011)

The intestinal stem cell signature identifies colorectal cancer stem cells and predicts disease relapse

Merlos-Suárez A, Barriga FM, Jung P, Iglesias M, Céspedes MV, Rossell D, Sevillano M, Hernando-Momblona X, da Silva-Diz V, Muñoz P, Clevers H, Sancho E, Mangues R and Batlle E.

Cell Stem Cell, 8 (5), 511-24 (2011)

Funding

This group receives financial support from the following sources:

Ministerio de Educación y Ciencia (Spanish Ministry of Science and Education)
Generalitat de Catalunya (DURSI) (Government of Catalonia)
SuppresSTEM consortium
Ministerio de Economía y Competitividad (MINECO)
European Commission (EC), Fondo Europeo de Desarrollo Regional (FEDER), "Una manera de hacer Europa"
European Research Council (ERC)

Projects

"A genome editing-based approach to study the stem cell hierarchy of human colorectal cancers" (EditCRC), financiado por el European Research Council (ERC) mediante el Programa de Investigación e Innovación de la Unión Europea 7th Framework Programme. Referencia: 340176

Grup de Recerca consolidat (SGR 2017-2019) de la Secretaria d'Universitats i Recerca del Departament d'Empresa i Coneixement de la Generalitat de Catalunya. Agencia de Gestió d'Ajuts Universitaris i de Recerca (AGAUR). Referencia: 2017 SGR 698

"Abordando el cancer colorrectal desde el microambiente del tumor" financiado por el Ministerio de Ciencia, Innovación y Universidades y por el Fondo Europeo de Desarrollo Regional (FEDER). Referencia: SAF2017-86782-R (FEDER, UE).

"ACRCelerate: Colorectal Cancer Stratified Medicine Network" financiado por la Fundación Científica AECC.

"Dual TGF-beta/checkpoint immunotherapy as curative treatment for microsatellite stable metastatic colorectal cancer: from biomarker to pre-clinical optimization" financiado por la Fundación Científica AECC. Referencia: PROYE18046BATL

"Colorectal Cancer Mouse Tumor Organoids as Pre-clinical Models for Therapeutical Testing" (CRC-MTOs), del European Research Council (ERC) mediante el Programa de Investigación e Innovación de la Unión Europea Horizonte 2020. Referencia: 825836

"Mechanisms of resistance to anti-TGF-beta therapies in metastatic colorectal cancer" financiado porel Worldwide Cancer Research (WCR). Referencia: 19-0005

"Evaluating immunotherapies in a preclinical model of metastatic colorectal cancer" financiado por la Fundación BBVA

"Origin and functions of the tumor stroma in metastatic colorectal cancer" funded by la Fundació La Caixa. Agreement: LCF/PR/HR19/52160018

"Accelerating our ability to understand and target complexity and heterogeneity in cancer through automated imaging of 3D cancer models including patient derived organoids" funded by Fundación Científica AECC. Reference: GEACC19006BAT