Serveis i Equipaments Principals
Biostatistics/Bioinformatics
Imatge
Core Facility Manager
Telephone:
+34 93 40 20217
Email:
camille.stephan@irbbarcelona.org
Meet Our Scientists Videos
Research information
Background
The mission of the Biostatistics/Bioinformatics Unit is to conduct collaborative research and to provide consultation and quantitative research resources to all IRB Barcelona research groups.
We assist scientists by providing both short and long-term consultancy services in the following areas:
- Experimental design: sample size, study design, planning of statistical methodology
- Data analysis: clinical or biomedical databases, genomics data
- Assistance with statistical methodology in own or others’ research
- Software: help in using software, develop software to meet special data analysis or study design needs
The facility conducts methodological research and develops resources in all of the above-mentioned areas.
For more information contact the manager of the Biostatistics/Bioinformatics Unit at
camille.stephan
irbbarcelona.org.
Selected publications
Embo Molecular Medicine
9
(7 )
869 -
879
(2017)
Cell Stem Cell
20
(6 )
801 -
+
(2017)
Nature
541
(7635 )
41 -
+
(2017)
Bioinformatics
31
(22 )
3631 -
3637
(2015)
Nucleic Acids Research
43
(10 )
5145 -
5157
(2015)
Nature Communications
6
(7049 )
7049 -
(2015)
Nature Genetics
47
(4 )
320 -
329
(2015)
Nature Cell Biology
16
(7 )
695 -
707
(2014)
Embo Journal
33
(6 )
637 -
647
(2014)
Nucleic Acids Research
42
(4 )
2126 -
2137
(2014)
Bioinformatics
28
(4 )
589 -
590
(2012)
Services
- Microarrays: Quality control, Differential expression, Enrichment analysis of GO and KEGG, GSEA GO and KEGG, Signature discovery
- RNASeq: Quality control, Differential expression, Enrichment analysis of GO and KEGG, Signature discovery, Isoform switching, SNP calling
- ChipSeq: Processing, Quality control, Peak definition + annotation + visualization, Differential Binding + Integrative analysis
- Whole Genome Sequencing: Processing, Quality control, SNP calling, Copy number alteration calling
- Whole Exome Sequencing: Processing, Quality control, SNP calling, Copy number alteration calling
- Proteomics: Processing, Quality control, Differential expression, Enrichment analysis of GO and KEGG
- Public database mining and analysis: Selection, Curation of clinical data, Processing of expression data, Association of expression and clinical data, Integration of copy number/genomic data
- TCGA analysis: Exploratory analysis in all cancer types: association between expression and clinical variables, Detailed analysis with curated clinical and technical variables: association with expression, Data integration: copy number, expression, mutations, etc
- Microbiome: Quality control + OTU estimation + differential abundance, Phylogenetic analysis
- Binding prediction: Prediction of binding to RNA/DNA by proteins/genes
- Single Cell Sequencing: Processing, Quality control, Differential expression, Clustering, Trajectories, Enrichment analysis of GO and KEGG
- Consulting: Statistical consulting, Data analysis, Custom services
- Experimental design
Group members
Group News
Científiques
8 nov. 2018
L'IRB Barcelona als mitjans
24 set. 2018
Innovació
14 febr. 2018
L'IRB Barcelona als mitjans
11 febr. 2017
Institucionals
1 ag. 2016
Científiques
23 jun 2014
Institucionals
13 des. 2012
Institucionals
23 nov. 2012
Institucionals
29 abr. 2011
